Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes REPS1
  • Mouse genes Reps1
  • Rat genes Reps1
  • Zfish genes reps1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Reps1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	REPS1	IPI	UniProtKB:Q15811	Human	PMID:20946875
Molecular Function	GO:0005515	protein binding	REPS1	IPI	UniProtKB:P49757	Human	PMID:23211419
Molecular Function	GO:0005515	protein binding	REPS1	IPI	UniProtKB:Q9QZS3-1	Human	PMID:23211419
Molecular Function	GO:0005515	protein binding	REPS1	IPI	UniProtKB:Q9QZS3-2	Human	PMID:23211419
Molecular Function	GO:0005515	protein binding	REPS1	IPI	UniProtKB:Q15311	Human	PMID:23414517
Molecular Function	GO:0005515	protein binding	REPS1	IPI	UniProtKB:Q15311	Human	PMID:31980649
Molecular Function	GO:0005515	protein binding	REPS1	IPI	UniProtKB:Q15311	Human	PMID:32203420
Molecular Function	GO:0005515	protein binding	Reps1	IPI	UniProtKB:Q62172	Mouse	MGI:MGI:1100650|PMID:9395447
Molecular Function	GO:0017124	SH3 domain binding	REPS1	IPI	UniProtKB:P49418	Human	PMID:20946875
Cellular Component	GO:0005905	clathrin-coated pit	REPS1	IDA		Human	PMID:20946875
Cellular Component	GO:0005829	cytosol	REPS1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	REPS1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	REPS1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	REPS1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	REPS1	IDA		Human	PMID:20946875

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern