Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RCHY1
  • Mouse genes Rchy1
  • Rat genes Rchy1
  • Zfish genes rchy1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rchy1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0002039	p53 binding	RCHY1	IPI	UniProtKB:P04637	Human	PMID:19043414
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q5T7V8	Human	PMID:15781263
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P04637	Human	PMID:17568776
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P04637	Human	PMID:19043414
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P62837	Human	PMID:19043414
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q00987	Human	PMID:19483087
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P04637	Human	PMID:20452352
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P04196	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P04637	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P18085	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q6UXH0	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q969F2	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q9NVV5	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q9UBE8	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:O60662	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P50222	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q6RFH5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q6UY14-3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q7Z4I7-5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q8TF42	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q9BYQ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q9C0C4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:K9N7C7:PRO_0000422441	Human	PMID:27519799
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P04637	Human	PMID:27519799
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P0C6X5:PRO_0000283876	Human	PMID:27519799
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:P0C6X7:PRO_0000037311	Human	PMID:27519799
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q13557	Human	PMID:27519799
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q7Z3S9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:O60662	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q02930-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q8TF42	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RCHY1	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0042803	protein homodimerization activity	RCHY1	IPI	UniProtKB:Q96PM5	Human	PMID:19483087
Molecular Function	GO:0005102	signaling receptor binding	Rchy1	IPI	RGD:1304698	Rat	PMID:18344599|RGD:2316178
Molecular Function	GO:0061630	ubiquitin protein ligase activity	RCHY1	IDA		Human	PMID:19483087
Molecular Function	GO:0008270	zinc ion binding	RCHY1	IDA		Human	PMID:19043414
Cellular Component	GO:0005737	cytoplasm	RCHY1	IDA		Human	PMID:15781263
Cellular Component	GO:0005829	cytosol	RCHY1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	RCHY1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	RCHY1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RCHY1	IDA		Human	PMID:19483087
Cellular Component	GO:0005634	nucleus	RCHY1	IDA		Human	PMID:25848801
Cellular Component	GO:0000151	ubiquitin ligase complex	RCHY1	IDA		Human	PMID:19043414
Biological Process	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	RCHY1	IDA		Human	PMID:19483087
Biological Process	GO:0031398	positive regulation of protein ubiquitination	RCHY1	IDA		Human	PMID:19483087
Biological Process	GO:0016567	protein ubiquitination	RCHY1	IDA		Human	PMID:19043414
Biological Process	GO:0016567	protein ubiquitination	RCHY1	IDA		Human	PMID:19483087
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	RCHY1	IDA		Human	PMID:19483087

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern