Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBM5
  • Mouse genes Rbm5
  • Rat genes Rbm5
  • Zfish genes rbm5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbm5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	RBM5	IDA		Human	PMID:18840686
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:O75643	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P08621	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P14678	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P26368	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P63162	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P84103	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:Q6P2Q9	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:Q9UKV3	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:O15042	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:O43143	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:Q9UMS4	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:O43143	Human	PMID:22569250
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P26368	Human	PMID:22569250
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:Q9UMS4	Human	PMID:22569250
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:O43143	Human	PMID:24304693
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P50221	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:Q6FHY5	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:O95822-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P02649	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P27797	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P36957	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P37173	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:Q8TDX7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBM5	IPI	UniProtKB:Q92876	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	RBM5	HDA		Human	PMID:22681889
Cellular Component	GO:0005654	nucleoplasm	RBM5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RBM5	IDA		Human	PMID:18951082
Biological Process	GO:0043065	positive regulation of apoptotic process	RBM5	IDA		Human	PMID:18840686
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	RBM5	IDA		Human	PMID:18840686
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	RBM5	IDA		Human	PMID:18951082
Biological Process	GO:0000245	spliceosomal complex assembly	RBM5	IDA		Human	PMID:18951082

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern