Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBBP9
  • Mouse genes Rbbp9
  • Rat genes Rbbp9
  • Zfish genes rbbp9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbbp9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RBBP9	IPI	UniProtKB:Q9NYB0	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	RBBP9	IPI	UniProtKB:O95199	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rbbp9	IPI	RGD:3540	Rat	PMID:9697699|RGD:69955
Molecular Function	GO:0005515	protein binding	Rbbp9	IPI	UniProtKB:P33568	Rat	PMID:9697699|RGD:69955
Cellular Component	GO:0005654	nucleoplasm	RBBP9	IDA		Human	GO_REF:0000052
Biological Process	GO:0072639	interleukin-33 production	Rbbp9	IDA		Mouse	PMID:32484881
Biological Process	GO:0072639	interleukin-33 production	Rbbp9	IMP	MGI:MGI:6506180	Mouse	PMID:32484881
Biological Process	GO:0010628	positive regulation of gene expression	Rbbp9	IDA		Mouse	PMID:32484881
Biological Process	GO:0042127	regulation of cell population proliferation	Rbbp9	IMP		Rat	PMID:9697699|RGD:69955
Biological Process	GO:0009624	response to nematode	Rbbp9	IMP	MGI:MGI:6506180	Mouse	PMID:32484881
Biological Process	GO:0009624	response to nematode	Rbbp9	IDA		Mouse	PMID:32484881
Biological Process	GO:0060510	type II pneumocyte differentiation	Rbbp9	IDA		Mouse	PMID:32484881

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern