Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAD51AP1
  • Mouse genes Rad51ap1
  • Rat genes Rad51ap1
  • Zfish genes rad51ap1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rad51ap1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0062037	D-loop DNA binding	RAD51AP1	IDA		Human	PMID:17996711
Molecular Function	GO:0003677	DNA binding	RAD51AP1	IDA		Human	PMID:31253762
Molecular Function	GO:0000217	DNA secondary structure binding	RAD51AP1	IDA		Human	PMID:17996710
Molecular Function	GO:0003690	double-stranded DNA binding	RAD51AP1	IDA		Human	PMID:17996711
Molecular Function	GO:0003690	double-stranded DNA binding	RAD51AP1	IDA		Human	PMID:26323318
Molecular Function	GO:0003690	double-stranded DNA binding	RAD51AP1	IDA		Human	PMID:9396801
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q06609	Human	PMID:16990250
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q06609	Human	PMID:17996710
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q06609	Human	PMID:17996711
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q14565	Human	PMID:17996711
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q86YC2	Human	PMID:20871616
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q06609	Human	PMID:23754376
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q8IUQ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q06609	Human	PMID:26323318
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q8TAF3	Human	PMID:27239033
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q8TAF3	Human	PMID:27463890
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q8IUQ4-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RAD51AP1	IPI	UniProtKB:Q06609	Human	PMID:9396801
Molecular Function	GO:0003723	RNA binding	RAD51AP1	IDA		Human	PMID:9396801
Molecular Function	GO:0003697	single-stranded DNA binding	RAD51AP1	IDA		Human	PMID:17996711
Molecular Function	GO:0003697	single-stranded DNA binding	RAD51AP1	IDA		Human	PMID:9396801
Cellular Component	GO:0000785	chromatin	RAD51AP1	IDA		Human	PMID:26323318
Cellular Component	GO:0005694	chromosome	Rad51ap1	IDA		Mouse	MGI:MGI:4946339|PMID:21307306
Cellular Component	GO:0005634	nucleus	RAD51AP1	IDA		Human	PMID:26323318
Cellular Component	GO:0005634	nucleus	Rad51ap1	IDA		Mouse	MGI:MGI:4946339|PMID:21307306
Cellular Component	GO:0005634	nucleus	Rad51ap1	IDA		Mouse	PMID:9192668
Cellular Component	GO:0032991	protein-containing complex	RAD51AP1	IMP		Human	PMID:16990250
Biological Process	GO:0071479	cellular response to ionizing radiation	RAD51AP1	IDA		Human	PMID:23754376
Biological Process	GO:0006974	DNA damage response	RAD51AP1	IDA		Human	PMID:17996710
Biological Process	GO:0006974	DNA damage response	RAD51AP1	IDA		Human	PMID:17996711
Biological Process	GO:0006310	DNA recombination	Rad51ap1	IPI	PR:Q08297	Mouse	PMID:9192668
Biological Process	GO:0000724	double-strand break repair via homologous recombination	RAD51AP1	IMP		Human	PMID:26323318
Biological Process	GO:0036297	interstrand cross-link repair	RAD51AP1	IMP		Human	PMID:26323318
Biological Process	GO:1905168	positive regulation of double-strand break repair via homologous recombination	RAD51AP1	IDA		Human	PMID:17996710
Biological Process	GO:1905168	positive regulation of double-strand break repair via homologous recombination	RAD51AP1	IDA		Human	PMID:17996711
Biological Process	GO:0010845	positive regulation of reciprocal meiotic recombination	RAD51AP1	IDA		Human	PMID:17996711
Biological Process	GO:0010569	regulation of double-strand break repair via homologous recombination	RAD51AP1	IDA		Human	PMID:23754376

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern