Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PSMD1
  • Mouse genes Psmd1
  • Rat genes Psmd1
  • Zfish genes psmd1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Psmd1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PSMD1	IPI	UniProtKB:Q16186	Human	PMID:16990800
Molecular Function	GO:0005515	protein binding	PSMD1	IPI	UniProtKB:Q8TCF1	Human	PMID:29804830
Molecular Function	GO:0005515	protein binding	PSMD1	IPI	UniProtKB:Q16186	Human	PMID:31064842
Molecular Function	GO:0005515	protein binding	Psmd1	IPI	PR:Q9JII7	Mouse	PMID:16973439
Molecular Function	GO:0031625	ubiquitin protein ligase binding	PSMD1	IPI	UniProtKB:Q9UNE7	Human	PMID:16207813
Cellular Component	GO:0016020	membrane	PSMD1	HDA		Human	PMID:19946888
Cellular Component	GO:0022624	proteasome accessory complex	Psmd1	IDA		Mouse	MGI:MGI:5442509|PMID:16857966
Cellular Component	GO:0000502	proteasome complex	PSMD1	IDA		Human	PMID:17323924
Cellular Component	GO:0000502	proteasome complex	Psmd1	IDA		Mouse	PMID:16973439

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern