Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PRPH2
  • Mouse genes Prph2
  • Rat genes Prph2
  • Zfish genes prph2a,prph2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Prph2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PRPH2	IPI	UniProtKB:O75400-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PRPH2	IPI	UniProtKB:P06307	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PRPH2	IPI	UniProtKB:P13473-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PRPH2	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Prph2	IPI	PR:P32958	Mouse	PMID:26420485
Molecular Function	GO:0005515	protein binding	Prph2	IPI	PR:P32958	Mouse	PMID:20055437
Molecular Function	GO:0042803	protein homodimerization activity	Prph2	IPI	PR:P15499	Mouse	PMID:20055437
Molecular Function	GO:0042803	protein homodimerization activity	Prph2	IPI	PR:P15499	Mouse	PMID:26420485
Molecular Function	GO:0042803	protein homodimerization activity	Prph2	IPI	PR:P15499	Mouse	PMID:28053051
Cellular Component	GO:0001750	photoreceptor outer segment	Prph2	IDA		Mouse	PMID:22183407
Cellular Component	GO:0001750	photoreceptor outer segment	Prph2	IDA		Mouse	PMID:28053051
Cellular Component	GO:0001750	photoreceptor outer segment	Prph2	IDA		Mouse	PMID:26420485
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	Prph2	IMP	MGI:MGI:1856523	Mouse	PMID:28053051
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	Prph2	IMP	MGI:MGI:1856523	Mouse	PMID:26420485
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	Prph2	IMP	MGI:MGI:6367794	Mouse	PMID:28053051
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	Prph2	IGI	MGI:MGI:97998	Mouse	PMID:28053051
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	Prph2	IMP	MGI:MGI:6367783	Mouse	PMID:26420485
Biological Process	GO:0035845	photoreceptor cell outer segment organization	Prph2	IGI	MGI:MGI:97998	Mouse	PMID:28053051
Biological Process	GO:0035845	photoreceptor cell outer segment organization	Prph2	IMP	MGI:MGI:6367794	Mouse	PMID:28053051
Biological Process	GO:0035845	photoreceptor cell outer segment organization	Prph2	IMP	MGI:MGI:1856523	Mouse	PMID:28053051
Biological Process	GO:0051291	protein heterooligomerization	Prph2	IPI	PR:P32958	Mouse	PMID:20055437
Biological Process	GO:0051260	protein homooligomerization	Prph2	IPI	PR:P15499	Mouse	PMID:20055437
Biological Process	GO:0009645	response to low light intensity stimulus	Prph2	IEP		Rat	PMID:8320859|RGD:8553226
Biological Process	GO:0060041	retina development in camera-type eye	Prph2	IMP	MGI:MGI:1856523	Mouse	PMID:15964665
Biological Process	GO:0060041	retina development in camera-type eye	Prph2	IMP	MGI:MGI:1856523	Mouse	PMID:28053051
Biological Process	GO:0060041	retina development in camera-type eye	Prph2	IGI	MGI:MGI:97998	Mouse	PMID:28053051
Biological Process	GO:0060041	retina development in camera-type eye	Prph2	IMP	MGI:MGI:6367794	Mouse	PMID:28053051
Biological Process	GO:0060041	retina development in camera-type eye	Prph2	IMP		Mouse	PMID:21052544

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern