Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PRDM12
  • Mouse genes Prdm12
  • Rat genes Prdm12
  • Zfish genes prdm12a,prdm12b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Prdm12

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140713	histone chaperone activity	PRDM12	IDA		Human	PMID:26005867
Molecular Function	GO:0140713	histone chaperone activity	Prdm12	IDA		Mouse	PMID:26005867
Molecular Function	GO:1990226	histone methyltransferase binding	PRDM12	IDA		Human	PMID:26005867
Cellular Component	GO:0005654	nucleoplasm	PRDM12	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PRDM12	IDA		Human	PMID:26005867
Biological Process	GO:0050965	detection of temperature stimulus involved in sensory perception of pain	PRDM12	IMP		Human	PMID:26005867
Biological Process	GO:0002244	hematopoietic progenitor cell differentiation	prdm12b	IMP		Zfish	PMID:24240475
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Prdm12	IDA		Mouse	MGI:MGI:5881892|PMID:26443638
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	prdm12b	IDA		Zfish	PMID:30813944
Biological Process	GO:0022008	neurogenesis	Prdm12	IDA		Mouse	PMID:19050759
Biological Process	GO:0031175	neuron projection development	PRDM12	IMP		Human	PMID:26005867
Biological Process	GO:0060319	primitive erythrocyte differentiation	prdm12b	IMP		Zfish	PMID:24240475
Biological Process	GO:0006479	protein methylation	PRDM12	IDA		Human	PMID:26005867
Biological Process	GO:0006479	protein methylation	Prdm12	IDA		Mouse	PMID:26005867
Biological Process	GO:0019233	sensory perception of pain	PRDM12	IMP		Human	PMID:26005867
Biological Process	GO:0021521	ventral spinal cord interneuron specification	prdm12b	IMP	ZFIN:ZDB-MRPHLNO-140710-5	Zfish	PMID:24631215

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern