Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes POM121,POM121B,POM121C
  • Mouse genes Pom121
  • Rat genes Pom121
  • Zfish genes pom121
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pom121

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	POM121C	IPI	UniProtKB:Q9BQA5	Human	PMID:17577209
Molecular Function	GO:0005515	protein binding	POM121C	IPI	UniProtKB:Q14974	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	POM121C	IPI	UniProtKB:Q14974	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:O95994	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:Q8IYF3	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:Q93062	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:P51116	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:O95994	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:P51116	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:Q6ZW49-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:Q8IYF3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:Q8TAP6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:Q93062	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:Q9NSC5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	POM121	IPI	UniProtKB:Q93009	Human	PMID:35044719
Molecular Function	GO:0017056	structural constituent of nuclear pore	Pom121	IDA		Rat	PMID:8335683|RGD:729484
Cellular Component	GO:0005635	nuclear envelope	POM121	IDA		Human	PMID:24315095
Cellular Component	GO:0031965	nuclear membrane	POM121C	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031965	nuclear membrane	POM121	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005643	nuclear pore	Pom121	IDA		Rat	PMID:8335683|RGD:729484
Cellular Component	GO:0005654	nucleoplasm	POM121C	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	POM121	IDA		Human	GO_REF:0000052
Biological Process	GO:0006999	nuclear pore organization	Pom121	IDA		Rat	PMID:8335683|RGD:729484

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern