Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes POLR2D
  • Mouse genes Polr2d
  • Rat genes Polr2d
  • Zfish genes polr2d
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Polr2d

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	POLR2D	IPI	UniProtKB:P62875	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	POLR2D	IPI	UniProtKB:P62875	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	POLR2D	IPI	UniProtKB:P62875	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	POLR2D	IPI	UniProtKB:P62487	Human	PMID:9528765
Cellular Component	GO:0005829	cytosol	POLR2D	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	POLR2D	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	POLR2D	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	POLR2D	IDA		Human	PMID:9852112
Cellular Component	GO:0005665	RNA polymerase II, core complex	POLR2D	IDA		Human	PMID:9528765
Cellular Component	GO:0005665	RNA polymerase II, core complex	POLR2D	IDA		Human	PMID:9852112
Biological Process	GO:0006366	transcription by RNA polymerase II	POLR2D	IMP		Human	PMID:9528765
Biological Process	GO:0006366	transcription by RNA polymerase II	POLR2D	IDA		Human	PMID:9852112

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern