Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PNRC2
  • Mouse genes Pnrc2
  • Rat genes Pnrc2
  • Zfish genes pnrc2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pnrc2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PNRC2	IPI	UniProtKB:Q92900	Human	PMID:19150429
Molecular Function	GO:0005515	protein binding	PNRC2	IPI	UniProtKB:Q9NPI6	Human	PMID:19150429
Molecular Function	GO:0005515	protein binding	PNRC2	IPI	UniProtKB:Q9NPI6	Human	PMID:24510189
Molecular Function	GO:0005515	protein binding	PNRC2	IPI	UniProtKB:Q9NPI6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PNRC2	IPI	UniProtKB:Q9NPI6	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PNRC2	IPI	UniProtKB:P51570	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PNRC2	IPI	UniProtKB:P62508-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PNRC2	IPI	UniProtKB:Q8N9N5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PNRC2	IPI	UniProtKB:Q9NPI6	Human	PMID:32296183
Cellular Component	GO:0005794	Golgi apparatus	PNRC2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PNRC2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PNRC2	IDA		Human	PMID:19150429
Cellular Component	GO:0000932	P-body	PNRC2	IDA		Human	PMID:19150429
Biological Process	GO:0000956	nuclear-transcribed mRNA catabolic process	pnrc2	IMP	ZFIN:ZDB-GENO-180208-14	Zfish	PMID:28648842
Biological Process	GO:0000956	nuclear-transcribed mRNA catabolic process	pnrc2	IMP	ZFIN:ZDB-MRPHLNO-180208-3	Zfish	PMID:28648842
Biological Process	GO:0000956	nuclear-transcribed mRNA catabolic process	pnrc2	IGI	ZFIN:ZDB-GENE-040426-2836	Zfish	PMID:28648842
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	PNRC2	IDA		Human	PMID:19150429

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern