Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PNLDC1
  • Mouse genes Pnldc1
  • Rat genes Pnldc1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pnldc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004535	poly(A)-specific ribonuclease activity	PNLDC1	IDA		Human	PMID:27515512
Molecular Function	GO:0004535	poly(A)-specific ribonuclease activity	Pnldc1	IDA		Mouse	MGI:MGI:5825409|PMID:27515512
Cellular Component	GO:0005783	endoplasmic reticulum	PNLDC1	IDA		Human	PMID:27515512
Cellular Component	GO:0005783	endoplasmic reticulum	Pnldc1	IDA		Mouse	MGI:MGI:5825409|PMID:27515512
Biological Process	GO:0001825	blastocyst formation	Pnldc1	IMP		Mouse	PMID:27869233
Biological Process	GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	PNLDC1	IDA		Human	PMID:27515512
Biological Process	GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	Pnldc1	IDA		Mouse	MGI:MGI:5825409|PMID:27515512
Biological Process	GO:0034587	piRNA processing	PNLDC1	IMP		Human	PMID:34347949
Biological Process	GO:0007283	spermatogenesis	PNLDC1	IMP		Human	PMID:34347949

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern