Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PMM2
  • Mouse genes Pmm2
  • Rat genes Pmm2
  • Zfish genes pmm2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pmm2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PMM2	IPI	UniProtKB:Q96HD9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PMM2	IPI	UniProtKB:Q96HD9	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	PMM2	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMM2	IPI	UniProtKB:Q96HD9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMM2	IPI	UniProtKB:Q9HBY8-2	Human	PMID:32296183
Cellular Component	GO:0005737	cytoplasm	Pmm2	IDA		Mouse	PMID:16115222
Cellular Component	GO:0005829	cytosol	PMM2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043025	neuronal cell body	Pmm2	IDA		Mouse	PMID:16115222
Cellular Component	GO:0005654	nucleoplasm	PMM2	IDA		Human	GO_REF:0000052
Biological Process	GO:0090171	chondrocyte morphogenesis	pmm2	IGI	ZFIN:ZDB-MRPHLNO-121119-5,ZFIN:ZDB-MRPHLNO-121127-5	Zfish	PMID:22956764
Biological Process	GO:0090171	chondrocyte morphogenesis	pmm2	IMP	ZFIN:ZDB-MRPHLNO-121119-5	Zfish	PMID:22956764
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	pmm2	IMP	ZFIN:ZDB-MRPHLNO-121119-5	Zfish	PMID:22956764
Biological Process	GO:0022008	neurogenesis	pmm2	IMP	ZFIN:ZDB-MRPHLNO-121119-5	Zfish	PMID:22956764
Biological Process	GO:0006487	protein N-linked glycosylation	pmm2	IMP	ZFIN:ZDB-MRPHLNO-121119-5	Zfish	PMID:22956764
Biological Process	GO:0006487	protein N-linked glycosylation	pmm2	IMP	ZFIN:ZDB-GENO-181211-1	Zfish	PMID:29472449

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern