Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PGAP2
  • Mouse genes Pgap2
  • Rat genes Pgap2
  • Zfish genes pgap2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pgap2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PGAP2	IPI	UniProtKB:P60411	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PGAP2	IPI	UniProtKB:Q96BA8	Human	PMID:26871637
Cellular Component	GO:0005783	endoplasmic reticulum	Pgap2	IDA		Rat	PMID:16407401|RGD:8553507
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Pgap2	IDA		Rat	PMID:16407401|RGD:8553507
Cellular Component	GO:0005794	Golgi apparatus	Pgap2	IDA		Rat	PMID:16407401|RGD:8553507
Cellular Component	GO:0000139	Golgi membrane	Pgap2	IDA		Rat	PMID:16407401|RGD:8553507
Biological Process	GO:0006506	GPI anchor biosynthetic process	PGAP2	IMP		Human	PMID:29374258
Biological Process	GO:0006506	GPI anchor biosynthetic process	Pgap2	IMP		Rat	PMID:16407401|RGD:8553507
Biological Process	GO:0072659	protein localization to plasma membrane	Pgap2	IGI	UniProtKB:Q2ABP2	Rat	PMID:16407401|RGD:8553507

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern