Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCGF6
  • Mouse genes Pcgf6
  • Rat genes Pcgf6
  • Zfish genes pcgf6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcgf6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:O00257-3	Human	PMID:21282530
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:O95931	Human	PMID:21282530
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q9HC52	Human	PMID:21282530
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q06587	Human	PMID:22493164
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q99496	Human	PMID:22493164
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q06587	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q99496	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q99496	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:O95931	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q06587	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q99496	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q9HC52	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:O95931	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q99496	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PCGF6	IPI	UniProtKB:Q9HC52	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	Pcgf6	IPI	UniProtKB:Q9CQJ4	Mouse	MGI:MGI:5908473|PMID:28596365
Cellular Component	GO:0005634	nucleus	PCGF6	IDA		Human	PMID:21282530
Cellular Component	GO:0005634	nucleus	Pcgf6	IDA		Mouse	MGI:MGI:5908473|PMID:28596365
Cellular Component	GO:0005634	nucleus	Pcgf6	IDA		Mouse	PMID:12167161
Cellular Component	GO:0031519	PcG protein complex	PCGF6	IDA		Human	PMID:21282530
Cellular Component	GO:0031519	PcG protein complex	PCGF6	IDA		Human	PMID:26151332
Cellular Component	GO:0031519	PcG protein complex	Pcgf6	IDA		Mouse	MGI:MGI:5908473|PMID:28596365
Cellular Component	GO:0035102	PRC1 complex	PCGF6	IDA		Human	PMID:19636380
Biological Process	GO:0036353	histone H2A-K119 monoubiquitination	PCGF6	IMP		Human	PMID:26151332
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	PCGF6	IDA		Human	PMID:8521824
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Pcgf6	IDA		Mouse	MGI:MGI:77887|PMID:8521824

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern