Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCDH12
  • Mouse genes Pcdh12
  • Rat genes Pcdh12
  • Zfish genes pcdh12
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcdh12

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005911	cell-cell junction	Pcdh12	IDA		Mouse	PMID:16269175
Cellular Component	GO:0005911	cell-cell junction	Pcdh12	IDA		Mouse	PMID:9651350
Cellular Component	GO:0070062	extracellular exosome	PCDH12	HDA		Human	PMID:23533145
Biological Process	GO:0016339	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules	Pcdh12	IDA		Mouse	PMID:9651350
Biological Process	GO:0005977	glycogen metabolic process	Pcdh12	IMP	MGI:MGI:3512625	Mouse	PMID:18477666
Biological Process	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	Pcdh12	IDA		Mouse	PMID:9651350
Biological Process	GO:0060711	labyrinthine layer development	Pcdh12	IMP	MGI:MGI:3512625	Mouse	PMID:18477666

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern