Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PACC1
  • Mouse genes Pacc1
  • Rat genes Pacc1
  • Zfish genes pacc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pacc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0061797	pH-gated chloride channel activity	PACC1	IDA		Human	PMID:31023925
Molecular Function	GO:0061797	pH-gated chloride channel activity	PACC1	IDA		Human	PMID:31318332
Molecular Function	GO:0061797	pH-gated chloride channel activity	Pacc1	IMP		Mouse	MGI:MGI:6294694|PMID:31023925
Molecular Function	GO:0061797	pH-gated chloride channel activity	pacc1	IDA		Zfish	PMID:31023925|ZFIN:ZDB-PUB-190427-5
Molecular Function	GO:0005515	protein binding	PACC1	IPI	UniProtKB:Q9BVK8	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PACC1	IPI	UniProtKB:Q04941	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PACC1	IPI	UniProtKB:Q4LDR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PACC1	IPI	UniProtKB:Q96IW7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PACC1	IPI	UniProtKB:Q9BVK8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PACC1	IPI	UniProtKB:Q9Y342	Human	PMID:32296183
Cellular Component	GO:0009986	cell surface	PACC1	HDA		Human	PMID:19581412
Cellular Component	GO:0005886	plasma membrane	PACC1	IDA		Human	PMID:31023925
Cellular Component	GO:0005886	plasma membrane	PACC1	IDA		Human	PMID:31318332
Biological Process	GO:0006821	chloride transport	PACC1	IDA		Human	PMID:31023925
Biological Process	GO:0006821	chloride transport	PACC1	IDA		Human	PMID:31318332
Biological Process	GO:0006821	chloride transport	Pacc1	IMP		Mouse	MGI:MGI:6294694|PMID:31023925
Biological Process	GO:0006821	chloride transport	pacc1	IDA		Zfish	PMID:31023925|ZFIN:ZDB-PUB-190427-5

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern