Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OSGEP
  • Mouse genes Osgep
  • Rat genes Osgep
  • Zfish genes osgep
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Osgep

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140101	catalytic activity, acting on a tRNA	OSGEP	IDA		Human	PMID:28805828
Molecular Function	GO:0061711	N(6)-L-threonylcarbamoyladenine synthase activity	OSGEP	IDA		Human	PMID:28805828
Molecular Function	GO:0005515	protein binding	OSGEP	IPI	UniProtKB:Q96S44	Human	PMID:23414517
Molecular Function	GO:0005515	protein binding	OSGEP	IPI	UniProtKB:Q96S44	Human	PMID:23455922
Molecular Function	GO:0005515	protein binding	OSGEP	IPI	UniProtKB:Q14657,UniProtKB:Q96S44,UniProtKB:Q9BXV9,UniProtKB:Q9Y3C4	Human	PMID:27903914
Molecular Function	GO:0005515	protein binding	OSGEP	IPI	UniProtKB:Q14657	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	OSGEP	IPI	UniProtKB:Q96S44	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	OSGEP	IPI	UniProtKB:O95817	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OSGEP	IPI	UniProtKB:Q14657	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OSGEP	IPI	UniProtKB:Q96S44	Human	PMID:32707033
Cellular Component	GO:0005737	cytoplasm	OSGEP	IDA		Human	PMID:28805828
Cellular Component	GO:0000408	EKC/KEOPS complex	OSGEP	IDA		Human	PMID:27903914
Cellular Component	GO:0000408	EKC/KEOPS complex	OSGEP	IDA		Human	PMID:28805828
Cellular Component	GO:0000408	EKC/KEOPS complex	OSGEP	IDA		Human	PMID:31481669
Cellular Component	GO:0016607	nuclear speck	OSGEP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	OSGEP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	OSGEP	IDA		Human	PMID:27903914
Cellular Component	GO:0005634	nucleus	OSGEP	IDA		Human	PMID:28805828
Cellular Component	GO:0005886	plasma membrane	OSGEP	IDA		Human	GO_REF:0000052
Biological Process	GO:0006400	tRNA modification	OSGEP	IDA		Human	PMID:28805828
Biological Process	GO:0002949	tRNA threonylcarbamoyladenosine modification	OSGEP	IDA		Human	PMID:28805828
Biological Process	GO:0002949	tRNA threonylcarbamoyladenosine modification	OSGEP	IMP		Human	PMID:31481669

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern