Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NUP107
  • Mouse genes Nup107
  • Rat genes Nup107
  • Zfish genes nup107
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nup107

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q8WUM0	Human	PMID:11564755
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:P55735	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q12769	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q8NFH3	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q8NFH4	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q8WUM0	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q9BW27	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:P49454	Human	PMID:17363900
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q8WUM0	Human	PMID:17363900
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q9ULZ3	Human	PMID:24407287
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q8WUM0	Human	PMID:26411495
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q8WUM0	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q8WUM0	Human	PMID:27194810
Molecular Function	GO:0005515	protein binding	NUP107	IPI	UniProtKB:Q8WUM0	Human	PMID:30179222
Molecular Function	GO:0017056	structural constituent of nuclear pore	NUP107	IDA		Human	PMID:11684705
Molecular Function	GO:0017056	structural constituent of nuclear pore	NUP107	IMP		Human	PMID:15229283
Cellular Component	GO:0000776	kinetochore	NUP107	IDA		Human	PMID:17363900
Cellular Component	GO:0016020	membrane	NUP107	HDA		Human	PMID:19946888
Cellular Component	GO:0005635	nuclear envelope	NUP107	IDA		Human	PMID:24315095
Cellular Component	GO:0031965	nuclear membrane	NUP107	IDA		Human	PMID:12802065
Cellular Component	GO:0031965	nuclear membrane	NUP107	IDA		Human	PMID:15229283
Cellular Component	GO:0031965	nuclear membrane	Nup107	IDA		Rat	PMID:19167330|RGD:10401189
Cellular Component	GO:0034399	nuclear periphery	NUP107	IDA		Human	PMID:15229283
Cellular Component	GO:0005643	nuclear pore	NUP107	IDA		Human	PMID:11564755
Cellular Component	GO:0005643	nuclear pore	NUP107	IDA		Human	PMID:11684705
Cellular Component	GO:0005643	nuclear pore	NUP107	IDA		Human	PMID:12802065
Cellular Component	GO:0005643	nuclear pore	NUP107	IDA		Human	PMID:15229283
Cellular Component	GO:0005643	nuclear pore	NUP107	IDA		Human	PMID:26411495
Cellular Component	GO:0005643	nuclear pore	Nup107	IDA		Rat	PMID:19167330|RGD:10401189
Cellular Component	GO:0031080	nuclear pore outer ring	NUP107	IDA		Human	PMID:17360435
Biological Process	GO:0008585	female gonad development	NUP107	IMP		Human	PMID:26485283
Biological Process	GO:0006406	mRNA export from nucleus	NUP107	IDA		Human	PMID:11684705
Biological Process	GO:0006406	mRNA export from nucleus	nup107	IMP	ZFIN:ZDB-GENO-121205-17	Zfish	PMID:22965233
Biological Process	GO:0072006	nephron development	NUP107	IMP		Human	PMID:30179222
Biological Process	GO:0051292	nuclear pore complex assembly	NUP107	IMP		Human	PMID:15229283
Biological Process	GO:0051292	nuclear pore complex assembly	nup107	IMP	ZFIN:ZDB-GENO-121205-17	Zfish	PMID:22965233

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern