Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NUDC
  • Mouse genes Nudc
  • Rat genes Nudc
  • Zfish genes nudc
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nudc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	NUDC	HDA		Human	PMID:25468996
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:M0R2J8	Human	PMID:22159412
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:O60884	Human	PMID:25036637
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:Q8TC44	Human	PMID:25036637
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:Q8WVS4	Human	PMID:25036637
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:Q9UKT8	Human	PMID:25036637
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:Q9HC35	Human	PMID:25789526
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:Q8TC44	Human	PMID:26638075
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:Q8WVS4	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:Q8TC44	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:O14908-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:P02489	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUDC	IPI	UniProtKB:Q86V38	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Nudc	IPI	UniProtKB:Q61768	Mouse	MGI:MGI:4430931|PMID:20019668
Molecular Function	GO:0005515	protein binding	Nudc	IPI	UniProtKB:P43034	Mouse	MGI:MGI:1928549|PMID:11163258
Molecular Function	GO:0005515	protein binding	Nudc	IPI	UniProtKB:Q61206	Mouse	MGI:MGI:3718915|PMID:17555748
Molecular Function	GO:0005515	protein binding	Nudc	IPI	PR:E9Q9D5	Mouse	PMID:23055941
Molecular Function	GO:0005515	protein binding	Nudc	IPI	RGD:620331	Rat	PMID:9601647|RGD:4107037
Cellular Component	GO:0005737	cytoplasm	NUDC	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005737	cytoplasm	NUDC	IDA		Human	PMID:25468996
Cellular Component	GO:0005829	cytosol	NUDC	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	Nudc	IDA		Rat	PMID:9457053|RGD:2302410
Cellular Component	GO:0030496	midbody	NUDC	IDA		Human	PMID:25789526
Cellular Component	GO:0072686	mitotic spindle	NUDC	IDA		Human	PMID:25789526
Biological Process	GO:0060271	cilium assembly	nudc	IGI	ZFIN:ZDB-GENE-030131-215	Zfish	PMID:26704451
Biological Process	GO:0061371	determination of heart left/right asymmetry	nudc	IGI	ZFIN:ZDB-GENE-030131-215	Zfish	PMID:26704451
Biological Process	GO:0007080	mitotic metaphase plate congression	NUDC	IMP		Human	PMID:25789526
Biological Process	GO:0007052	mitotic spindle organization	NUDC	IMP		Human	PMID:25789526
Biological Process	GO:0007097	nuclear migration	Nudc	IMP		Rat	PMID:9013770|RGD:2302411
Biological Process	GO:0043434	response to peptide hormone	Nudc	IEP		Rat	PMID:9457053|RGD:2302410

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern