Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NSUN6
  • Mouse genes Nsun6
  • Rat genes Nsun6
  • Zfish genes nsun6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nsun6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016428	tRNA (cytosine-5-)-methyltransferase activity	NSUN6	EXP		Human	PMID:26160102
Molecular Function	GO:0016428	tRNA (cytosine-5-)-methyltransferase activity	NSUN6	IDA		Human	PMID:26160102
Molecular Function	GO:0016428	tRNA (cytosine-5-)-methyltransferase activity	NSUN6	IDA		Human	PMID:27703015
Molecular Function	GO:0016428	tRNA (cytosine-5-)-methyltransferase activity	NSUN6	IDA		Human	PMID:28531330
Molecular Function	GO:0000049	tRNA binding	NSUN6	IDA		Human	PMID:26160102
Molecular Function	GO:0000049	tRNA binding	NSUN6	IDA		Human	PMID:28531330
Cellular Component	GO:0005737	cytoplasm	NSUN6	IDA		Human	PMID:26160102
Biological Process	GO:0002946	tRNA C5-cytosine methylation	NSUN6	IDA		Human	PMID:26160102
Biological Process	GO:0030488	tRNA methylation	NSUN6	IDA		Human	PMID:28531330

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern