Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NSRP1
  • Mouse genes Nsrp1
  • Rat genes Nsrp1
  • Zfish genes nsrp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nsrp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	NSRP1	IDA		Human	PMID:21296756
Molecular Function	GO:0005515	protein binding	NSRP1	IPI	UniProtKB:Q01130	Human	PMID:21296756
Molecular Function	GO:0005515	protein binding	NSRP1	IPI	UniProtKB:Q07955	Human	PMID:21296756
Molecular Function	GO:0003723	RNA binding	NSRP1	HDA		Human	PMID:22658674
Cellular Component	GO:0016607	nuclear speck	NSRP1	IDA		Human	GO_REF:0000054
Cellular Component	GO:0016607	nuclear speck	NSRP1	IDA		Human	PMID:21296756
Cellular Component	GO:0005654	nucleoplasm	NSRP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NSRP1	IDA		Human	PMID:21296756
Cellular Component	GO:1990904	ribonucleoprotein complex	NSRP1	IDA		Human	PMID:21296756
Biological Process	GO:0032502	developmental process	NSRP1	IMP		Human	PMID:21296756
Biological Process	GO:0001701	in utero embryonic development	Nsrp1	IMP	MGI:MGI:3923407	Mouse	PMID:21296756
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	NSRP1	IDA		Human	PMID:21296756

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern