Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NMD3
  • Mouse genes Nmd3
  • Rat genes Nmd3
  • Zfish genes nmd3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nmd3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030674	protein-macromolecule adaptor activity	NMD3	IDA		Human	PMID:12773398
Molecular Function	GO:0043023	ribosomal large subunit binding	NMD3	IPI	UniProtKB:O14980,UniProtKB:P62826	Human	PMID:12724356
Molecular Function	GO:0043023	ribosomal large subunit binding	NMD3	IDA		Human	PMID:12773398
Molecular Function	GO:0003723	RNA binding	NMD3	HDA		Human	PMID:22658674
Cellular Component	GO:0005737	cytoplasm	NMD3	IDA		Human	PMID:12724356
Cellular Component	GO:0005737	cytoplasm	NMD3	IDA		Human	PMID:12773398
Cellular Component	GO:0005737	cytoplasm	NMD3	IDA		Human	PMID:23782956
Cellular Component	GO:0016020	membrane	NMD3	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	NMD3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	NMD3	IDA		Human	PMID:12773398
Cellular Component	GO:0005730	nucleolus	NMD3	IDA		Human	PMID:23782956
Cellular Component	GO:0005654	nucleoplasm	NMD3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	NMD3	IDA		Human	PMID:12773398
Cellular Component	GO:0005654	nucleoplasm	NMD3	IDA		Human	PMID:23782956
Biological Process	GO:0032092	positive regulation of protein binding	NMD3	IMP		Human	PMID:12724356
Biological Process	GO:1904751	positive regulation of protein localization to nucleolus	NMD3	IMP		Human	PMID:23782956
Biological Process	GO:1902680	positive regulation of RNA biosynthetic process	NMD3	IMP		Human	PMID:23782956
Biological Process	GO:0000055	ribosomal large subunit export from nucleus	NMD3	IMP		Human	PMID:12773398

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern