Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NEB
  • Mouse genes Neb
  • Rat genes Neb
  • Zfish genes neb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Neb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NEB	IPI	UniProtKB:Q07889	Human	PMID:12482578
Molecular Function	GO:0005515	protein binding	NEB	IPI	UniProtKB:Q86TC9	Human	PMID:12482578
Molecular Function	GO:0005515	protein binding	NEB	IPI	UniProtKB:Q8WZ42	Human	PMID:12482578
Molecular Function	GO:0005515	protein binding	NEB	IPI	UniProtKB:Q8WZ42	Human	PMID:16902413
Molecular Function	GO:0005515	protein binding	NEB	IPI	UniProtKB:O95425	Human	PMID:18639526
Molecular Function	GO:0005515	protein binding	NEB	IPI	UniProtKB:O60662	Human	PMID:23414517
Molecular Function	GO:0005515	protein binding	NEB	IPI	UniProtKB:O75923	Human	PMID:23414517
Molecular Function	GO:0005515	protein binding	NEB	IPI	UniProtKB:P17661	Human	PMID:23615443
Molecular Function	GO:0005515	protein binding	Neb	IPI	PR:Q9D783	Mouse	PMID:24960163
Cellular Component	GO:0043292	contractile fiber	Neb	IDA		Mouse	PMID:20368620
Cellular Component	GO:0070062	extracellular exosome	NEB	HDA		Human	PMID:19056867
Cellular Component	GO:0030016	myofibril	Neb	IDA		Rat	PMID:15745747|RGD:1600441
Cellular Component	GO:0030018	Z disc	NEB	IDA		Human	PMID:9501083
Cellular Component	GO:0030018	Z disc	Neb	IDA		Mouse	PMID:20368620
Biological Process	GO:0040011	locomotion	neb	IMP	ZFIN:ZDB-FISH-150901-9861	Zfish	PMID:31530540
Biological Process	GO:0055001	muscle cell development	neb	IMP	ZFIN:ZDB-GENO-120529-6	Zfish	PMID:22159874

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern