Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NBAS
  • Mouse genes Nbas
  • Rat genes Nbas
  • Zfish genes nbas
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nbas

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NBAS	IPI	UniProtKB:Q9NZ43	Human	PMID:29929043
Molecular Function	GO:0000149	SNARE binding	NBAS	IDA		Human	PMID:19369418
Cellular Component	GO:0070939	Dsl1/NZR complex	NBAS	IPI		Human	PMID:20462495
Cellular Component	GO:0070939	Dsl1/NZR complex	NBAS	IDA		Human	PMID:20462495
Cellular Component	GO:0005783	endoplasmic reticulum	NBAS	IDA		Human	PMID:19369418
Cellular Component	GO:0016020	membrane	NBAS	HDA		Human	PMID:19946888
Biological Process	GO:0043009	chordate embryonic development	nbas	IMP	ZFIN:ZDB-MRPHLNO-110623-6	Zfish	PMID:21227923
Biological Process	GO:0043009	chordate embryonic development	nbas	IMP	ZFIN:ZDB-MRPHLNO-110623-5	Zfish	PMID:21227923
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	nbas	IMP	ZFIN:ZDB-MRPHLNO-110623-6	Zfish	PMID:29929043
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	nbas	IMP	ZFIN:ZDB-MRPHLNO-110623-5	Zfish	PMID:29929043
Biological Process	GO:2000623	negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	NBAS	IMP		Human	PMID:23828042
Biological Process	GO:2000623	negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	nbas	IMP		Zfish	PMID:23828042|ZFIN:ZDB-PUB-130711-11
Biological Process	GO:0000956	nuclear-transcribed mRNA catabolic process	NBAS	IMP		Human	PMID:23828042
Biological Process	GO:0000956	nuclear-transcribed mRNA catabolic process	nbas	IMP		Zfish	PMID:23828042|ZFIN:ZDB-PUB-130711-11
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	nbas	IMP	ZFIN:ZDB-MRPHLNO-110623-6	Zfish	PMID:21227923
Biological Process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	NBAS	IMP		Human	PMID:19369418

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern