Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MYOF
  • Mouse genes Myof
  • Rat genes Myof
  • Zfish genes myof,myofl
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Myof

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005543	phospholipid binding	MYOF	IDA		Human	PMID:11959863
Molecular Function	GO:0005543	phospholipid binding	Myof	IMP		Mouse	MGI:MGI:4821066|PMID:17702744
Molecular Function	GO:0005515	protein binding	MYOF	IPI	UniProtKB:Q09666	Human	PMID:17185750
Molecular Function	GO:0005515	protein binding	MYOF	IPI	UniProtKB:Q8IVF2	Human	PMID:17185750
Molecular Function	GO:0005515	protein binding	MYOF	IPI	UniProtKB:Q9Y4F9	Human	PMID:24687993
Cellular Component	GO:0005901	caveola	Myof	IDA		Mouse	MGI:MGI:4821066|PMID:17702744
Cellular Component	GO:0031410	cytoplasmic vesicle	MYOF	IDA		Human	PMID:11959863
Cellular Component	GO:0070062	extracellular exosome	MYOF	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	MYOF	HDA		Human	PMID:21362503
Cellular Component	GO:0070062	extracellular exosome	MYOF	HDA		Human	PMID:23533145
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	MYOF	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	MYOF	IDA		Human	GO_REF:0000052
Biological Process	GO:0034605	cellular response to heat	Myof	IDA		Mouse	PMID:18755693
Biological Process	GO:0006071	glycerol metabolic process	Myof	IGI	MGI:MGI:1349385	Mouse	PMID:24177035
Biological Process	GO:0055001	muscle cell development	Myof	IGI	MGI:MGI:1349385	Mouse	PMID:24177035
Biological Process	GO:0001778	plasma membrane repair	Myof	IMP		Mouse	MGI:MGI:4821066|PMID:17702744
Biological Process	GO:0030947	regulation of vascular endothelial growth factor receptor signaling pathway	Myof	IMP		Mouse	MGI:MGI:4821066|PMID:17702744
Biological Process	GO:0033292	T-tubule organization	Myof	IGI	MGI:MGI:1349385	Mouse	PMID:24177035

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern