Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MSGN1
  • Mouse genes Msgn1
  • Rat genes Msgn1
  • Zfish genes msgn1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Msgn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Msgn1	IDA		Mouse	PMID:21750544
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Msgn1	IDA		Mouse	PMID:21750544
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:A0A0C4DG94	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:O14645	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:O95229	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:O95751	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P0C6T2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P0C7W6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P13349	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P15884-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P24592	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P24844-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P41134	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P43360	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P54257	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:P78358	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q02363	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q02535	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q10567-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q13077	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q13352	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q6PF05	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q6PJG6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q7Z6G3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q96N21	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q99081-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q9BXU0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q9H0C1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q9UJW9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSGN1	IPI	UniProtKB:Q9UPT5-1	Human	PMID:32296183
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	MSGN1	IDA		Human	PMID:28473536
Biological Process	GO:0007498	mesoderm development	msgn1	IEP		Zfish	PMID:12684777
Biological Process	GO:0007498	mesoderm development	msgn1	IGI	ZFIN:ZDB-GENO-121205-13,ZFIN:ZDB-MRPHLNO-121205-1	Zfish	PMID:22890044
Biological Process	GO:0048342	paraxial mesodermal cell differentiation	msgn1	IMP	ZFIN:ZDB-MRPHLNO-121205-1	Zfish	PMID:23172917
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	msgn1	IMP		Zfish	PMID:22890044
Biological Process	GO:0007379	segment specification	Msgn1	IMP	MGI:MGI:1933263	Mouse	PMID:11124811
Biological Process	GO:0007525	somatic muscle development	msgn1	IGI	ZFIN:ZDB-GENE-990615-5	Zfish	PMID:22890044
Biological Process	GO:0001756	somitogenesis	Msgn1	IMP	MGI:MGI:1933263	Mouse	PMID:11124811
Biological Process	GO:0001756	somitogenesis	Msgn1	IMP	MGI:MGI:1933263	Mouse	PMID:21750544

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern