Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MBNL1
  • Mouse genes Mbnl1
  • Rat genes Mbnl1
  • Zfish genes mbnl1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mbnl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003725	double-stranded RNA binding	MBNL1	IDA		Human	PMID:10970838
Molecular Function	GO:0005515	protein binding	MBNL1	IPI	UniProtKB:P31943	Human	PMID:16946708
Molecular Function	GO:0005515	protein binding	MBNL1	IPI	UniProtKB:P67809	Human	PMID:18335541
Molecular Function	GO:0005515	protein binding	MBNL1	IPI	UniProtKB:Q92499	Human	PMID:18335541
Molecular Function	GO:0005515	protein binding	MBNL1	IPI	UniProtKB:O75553	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MBNL1	IPI	UniProtKB:O75553	Human	PMID:29892012
Molecular Function	GO:0001069	regulatory region RNA binding	Mbnl1	IDA		Rat	PMID:23511971|RGD:10041054
Molecular Function	GO:0003723	RNA binding	MBNL1	IDA		Human	PMID:15257297
Molecular Function	GO:0003723	RNA binding	MBNL1	IDA		Human	PMID:16946708
Molecular Function	GO:0003723	RNA binding	MBNL1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	MBNL1	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	MBNL1	IDA		Human	PMID:10970838
Cellular Component	GO:0005737	cytoplasm	Mbnl1	IDA		Mouse	PMID:15830352
Cellular Component	GO:0005737	cytoplasm	Mbnl1	IDA		Mouse	PMID:19075228
Cellular Component	GO:0005737	cytoplasm	Mbnl1	IDA		Mouse	PMID:16717059
Cellular Component	GO:0010494	cytoplasmic stress granule	MBNL1	IDA		Human	PMID:18335541
Cellular Component	GO:0005829	cytosol	MBNL1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	MBNL1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	MBNL1	IDA		Human	PMID:10970838
Cellular Component	GO:0005634	nucleus	MBNL1	IDA		Human	PMID:15257297
Cellular Component	GO:0005634	nucleus	MBNL1	IDA		Human	PMID:16717059
Cellular Component	GO:0005634	nucleus	Mbnl1	IDA		Mouse	PMID:16717059
Cellular Component	GO:0005634	nucleus	Mbnl1	IDA		Mouse	PMID:15830352
Cellular Component	GO:0005634	nucleus	Mbnl1	IDA		Mouse	PMID:19075228
Cellular Component	GO:0005634	nucleus	Mbnl1	IDA		Rat	PMID:23511971|RGD:10041054
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	Mbnl1	IMP	MGI:MGI:3052922	Mouse	PMID:19075228
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	Mbnl1	IMP		Mouse	PMID:19720736
Biological Process	GO:0030326	embryonic limb morphogenesis	Mbnl1	IEP		Mouse	MGI:MGI:2675975|PMID:12915312
Biological Process	GO:0001701	in utero embryonic development	Mbnl1	IEP		Mouse	MGI:MGI:2675975|PMID:12915312
Biological Process	GO:0006376	mRNA splice site selection	Mbnl1	IMP	MGI:MGI:3052922	Mouse	PMID:14671308
Biological Process	GO:0006376	mRNA splice site selection	Mbnl1	IMP	MGI:MGI:3052922	Mouse	PMID:16717059
Biological Process	GO:0045445	myoblast differentiation	Mbnl1	IDA		Mouse	MGI:MGI:3690141|PMID:10970838
Biological Process	GO:0007399	nervous system development	Mbnl1	IEP		Mouse	MGI:MGI:2675975|PMID:12915312
Biological Process	GO:0043484	regulation of RNA splicing	MBNL1	IDA		Human	PMID:15257297
Biological Process	GO:0043484	regulation of RNA splicing	MBNL1	IDA		Human	PMID:16946708
Biological Process	GO:0008380	RNA splicing	MBNL1	IDA		Human	PMID:18335541
Biological Process	GO:0007519	skeletal muscle tissue development	Mbnl1	IMP	MGI:MGI:3052922	Mouse	PMID:16717059

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern