Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LRWD1
  • Mouse genes Lrwd1
  • Rat genes Lrwd1
  • Zfish genes lrwd1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lrwd1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	LRWD1	IDA		Human	PMID:20932478
Molecular Function	GO:0003682	chromatin binding	LRWD1	IDA		Human	PMID:21029866
Molecular Function	GO:0008327	methyl-CpG binding	LRWD1	IDA		Human	PMID:21029866
Molecular Function	GO:0035064	methylated histone binding	LRWD1	IDA		Human	PMID:21029866
Molecular Function	GO:0005515	protein binding	LRWD1	IPI	UniProtKB:O75496	Human	PMID:20932478
Molecular Function	GO:0005515	protein binding	LRWD1	IPI	UniProtKB:Q13416	Human	PMID:20932478
Molecular Function	GO:0005515	protein binding	LRWD1	IPI	UniProtKB:Q9H211	Human	PMID:20932478
Cellular Component	GO:0000781	chromosome, telomeric region	LRWD1	IDA		Human	PMID:20932478
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	LRWD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000776	kinetochore	LRWD1	IDA		Human	PMID:20813266
Cellular Component	GO:0005664	nuclear origin of replication recognition complex	LRWD1	IDA		Human	PMID:20932478
Cellular Component	GO:0005664	nuclear origin of replication recognition complex	LRWD1	IDA		Human	PMID:21029866
Cellular Component	GO:0005730	nucleolus	LRWD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	LRWD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	LRWD1	IDA		Human	PMID:18445686
Cellular Component	GO:0005634	nucleus	LRWD1	IDA		Human	PMID:21029866
Cellular Component	GO:0005721	pericentric heterochromatin	LRWD1	IDA		Human	PMID:20932478
Biological Process	GO:0006325	chromatin organization	LRWD1	IMP		Human	PMID:20932478
Biological Process	GO:0071169	establishment of protein localization to chromatin	LRWD1	IDA		Human	PMID:20932478

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern