Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LCORL
  • Mouse genes Lcorl
  • Rat genes Lcorl
  • Zfish genes lcorl
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lcorl

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:1990226	histone methyltransferase binding	LCORL	IPI	UniProtKB:Q15910	Human	PMID:29628311
Molecular Function	GO:0005515	protein binding	LCORL	IPI	UniProtKB:Q13363	Human	PMID:21900206
Molecular Function	GO:0005515	protein binding	LCORL	IPI	UniProtKB:Q13363	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	LCORL	IPI	UniProtKB:P43360	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LCORL	IPI	UniProtKB:Q13363	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	LCORL	IPI	UniProtKB:Q13363	Human	PMID:31041561
Molecular Function	GO:0005515	protein binding	LCORL	IPI	UniProtKB:Q13363	Human	PMID:35016035
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Lcorl	IDA		Mouse	PMID:12560079
Biological Process	GO:0006366	transcription by RNA polymerase II	Lcorl	IDA		Mouse	PMID:12560079

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern