Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GTF2F2
  • Mouse genes Gtf2f2
  • Rat genes Gtf2f2
  • Zfish genes gtf2f2a,gtf2f2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gtf2f2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:P35269	Human	PMID:11183778
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:O94763	Human	PMID:12737519
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:O94763	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:P46776	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:Q8WW35	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:P35269	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:P35269	Human	PMID:31467278
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:Q14192	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:Q96E35	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:Q9UPY8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:P35269	Human	PMID:7854423
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:Q00403	Human	PMID:8504927
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:P35269	Human	PMID:8662660
Molecular Function	GO:0005515	protein binding	GTF2F2	IPI	UniProtKB:Q00403	Human	PMID:8662660
Molecular Function	GO:0005515	protein binding	Gtf2f2	IPI	UniProtKB:Q3TQR2	Mouse	PMID:14612417
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	Gtf2f2	IDA		Rat	PMID:1429731|RGD:632949
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	Gtf2f2	IDA		Rat	PMID:7929273|RGD:9681417
Cellular Component	GO:0015630	microtubule cytoskeleton	GTF2F2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	GTF2F2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	GTF2F2	HDA		Human	PMID:16791210
Cellular Component	GO:0005634	nucleus	GTF2F2	IDA		Human	PMID:9841876
Cellular Component	GO:0005674	transcription factor TFIIF complex	GTF2F2	IPI		Human	PMID:11183778
Cellular Component	GO:0005675	transcription factor TFIIH holo complex	Gtf2f2	IDA		Rat	PMID:7553866|RGD:9590319
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	GTF2F2	IDA		Human	PMID:15351637
Biological Process	GO:0051123	RNA polymerase II preinitiation complex assembly	Gtf2f2	IDA		Rat	PMID:7929273|RGD:9681417
Biological Process	GO:0006366	transcription by RNA polymerase II	GTF2F2	IMP		Human	PMID:8662660
Biological Process	GO:0006366	transcription by RNA polymerase II	Gtf2f2	IDA		Rat	PMID:1429731|RGD:632949
Biological Process	GO:0006366	transcription by RNA polymerase II	Gtf2f2	IDA		Rat	PMID:7553866|RGD:9590319
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	GTF2F2	IDA		Human	PMID:15351637
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	Gtf2f2	IDA		Rat	PMID:7929273|RGD:9681417
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	GTF2F2	IDA		Human	PMID:15351637
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	Gtf2f2	IDA		Rat	PMID:7929273|RGD:9681417

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern