Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GNE
  • Mouse genes Gne
  • Rat genes Gne
  • Zfish genes gne
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gne

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0009384	N-acylmannosamine kinase activity	Gne	IDA		Rat	PMID:9305888|RGD:68786
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:P12814	Human	PMID:18560563
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:O43597	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:P26371	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:P60370	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:P60409	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:P60410	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:P60411	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:Q15323	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:Q6UY14-3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:Q969Y2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:Q9BQ66	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:Q9BYQ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNE	IPI	UniProtKB:Q7Z3S9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Gne	IPI	UniProtKB:Q05516	Rat	PMID:17118363|RGD:8554691
Molecular Function	GO:0008761	UDP-N-acetylglucosamine 2-epimerase activity	Gne	IDA		Rat	PMID:9305888|RGD:68786
Molecular Function	GO:0008761	UDP-N-acetylglucosamine 2-epimerase activity	gne	IDA		Zfish	PMID:24488768
Cellular Component	GO:0005829	cytosol	Gne	IDA		Rat	PMID:9305888|RGD:68786
Biological Process	GO:0043009	chordate embryonic development	gne	IMP	ZFIN:ZDB-MRPHLNO-140703-2	Zfish	PMID:24488768
Biological Process	GO:0043009	chordate embryonic development	gne	IMP	ZFIN:ZDB-MRPHLNO-140703-1	Zfish	PMID:24488768
Biological Process	GO:0040011	locomotion	gne	IMP	ZFIN:ZDB-MRPHLNO-140703-2	Zfish	PMID:24488768
Biological Process	GO:0055001	muscle cell development	gne	IMP	ZFIN:ZDB-MRPHLNO-140703-2	Zfish	PMID:24488768
Biological Process	GO:0055001	muscle cell development	gne	IMP	ZFIN:ZDB-MRPHLNO-140703-1	Zfish	PMID:24488768

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern