Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GGCX
  • Mouse genes Ggcx
  • Rat genes Ggcx
  • Zfish genes ggcx
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ggcx

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008488	gamma-glutamyl carboxylase activity	GGCX	IDA		Human	PMID:17073445
Molecular Function	GO:0008488	gamma-glutamyl carboxylase activity	Ggcx	IDA		Rat	PMID:12754193|RGD:1582507
Molecular Function	GO:0019842	vitamin binding	Ggcx	IDA		Rat	PMID:12754193|RGD:1582507
Cellular Component	GO:0005789	endoplasmic reticulum membrane	GGCX	IDA		Human	PMID:10910912
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Ggcx	IDA		Rat	PMID:12754193|RGD:1582507
Biological Process	GO:0060437	lung growth	Ggcx	IEP		Rat	PMID:2717270|RGD:11040517
Biological Process	GO:0017187	peptidyl-glutamic acid carboxylation	Ggcx	IDA		Rat	PMID:12617985|RGD:1598952
Biological Process	GO:0071548	response to dexamethasone	Ggcx	IEP		Rat	PMID:2717270|RGD:11040517
Biological Process	GO:0010042	response to manganese ion	Ggcx	IEP		Rat	PMID:7409196|RGD:11040522
Biological Process	GO:0070482	response to oxygen levels	Ggcx	IEP		Rat	PMID:3699166|RGD:11040523
Biological Process	GO:0071107	response to parathyroid hormone	Ggcx	IEP		Rat	PMID:6688809|RGD:11040516
Biological Process	GO:1904016	response to Thyroglobulin triiodothyronine	Ggcx	IEP		Rat	PMID:2717270|RGD:11040517
Biological Process	GO:0033280	response to vitamin D	Ggcx	IEP		Rat	PMID:3840747|RGD:11040515
Biological Process	GO:0032571	response to vitamin K	Ggcx	IEP		Rat	PMID:8702425|RGD:2316484
Biological Process	GO:0042373	vitamin K metabolic process	GGCX	IDA		Human	PMID:17073445

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern