Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GDE1
  • Mouse genes Gde1
  • Rat genes Gde1
  • Zfish genes gde1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gde1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008889	glycerophosphodiester phosphodiesterase activity	Gde1	IMP		Mouse	MGI:MGI:5295534|PMID:21801852
Molecular Function	GO:0047395	glycerophosphoinositol glycerophosphodiesterase activity	Gde1	IMP		Mouse	MGI:MGI:3793397|PMID:18227059
Molecular Function	GO:0047395	glycerophosphoinositol glycerophosphodiesterase activity	Gde1	IDA		Mouse	PMID:25596343
Molecular Function	GO:0004622	lysophospholipase activity	Gde1	IDA		Mouse	PMID:25596343
Molecular Function	GO:0008081	phosphoric diester hydrolase activity	Gde1	IDA		Mouse	PMID:25596343
Molecular Function	GO:0005515	protein binding	GDE1	IPI	UniProtKB:Q14973	Human	PMID:32296183
Cellular Component	GO:0016020	membrane	Gde1	IDA		Mouse	PMID:25596343
Cellular Component	GO:0016020	membrane	Gde1	IDA		Rat	PMID:10760272|RGD:633189
Cellular Component	GO:0005886	plasma membrane	Gde1	IMP		Mouse	MGI:MGI:3793397|PMID:18227059
Biological Process	GO:0006580	ethanolamine metabolic process	Gde1	IMP		Mouse	MGI:MGI:3793397|PMID:18227059
Biological Process	GO:0070291	N-acylethanolamine metabolic process	Gde1	IMP		Mouse	MGI:MGI:5295534|PMID:21801852
Biological Process	GO:0070291	N-acylethanolamine metabolic process	Gde1	IDA		Mouse	PMID:25596343
Biological Process	GO:0006644	phospholipid metabolic process	Gde1	IDA		Mouse	PMID:25596343

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern