Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GCA
  • Mouse genes Gca
  • Rat genes Gca
  • Zfish genes gca
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gca

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	GCA	IDA		Human	PMID:11717497
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:P43361	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:P43361	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:P43361	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:P28070	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:P43361	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:Q12933	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:Q13077	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:Q13137	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:Q5SWW7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:Q8NFV4-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:Q9H4Y5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:Q9H6J7-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:Q9NP55	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	GCA	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0046982	protein heterodimerization activity	GCA	IPI	UniProtKB:P30626	Human	PMID:12804766
Molecular Function	GO:0042803	protein homodimerization activity	GCA	IPI	UniProtKB:P28676	Human	PMID:11717497
Cellular Component	GO:0005829	cytosol	GCA	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	GCA	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	GCA	HDA		Human	PMID:20458337
Cellular Component	GO:0070062	extracellular exosome	GCA	HDA		Human	PMID:23533145
Cellular Component	GO:0005886	plasma membrane	GCA	IDA		Human	GO_REF:0000052

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern