Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FDFT1
  • Mouse genes Fdft1
  • Rat genes Fdft1
  • Zfish genes fdft1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fdft1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004310	farnesyl-diphosphate farnesyltransferase activity	Fdft1	IDA		Rat	PMID:1400448|RGD:728402
Molecular Function	GO:0004310	farnesyl-diphosphate farnesyltransferase activity	Fdft1	IMP		Rat	PMID:16440058|RGD:1626611
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:O43889-2	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:A0A024R644	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:P04233-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:P11912	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:P48165	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q14973	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q3SXY8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q5JX71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q6IBW4-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q8N5M9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q8TDT2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q96MV1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q96RD7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q9GZR5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q9NQQ7-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FDFT1	IPI	UniProtKB:Q9Y320	Human	PMID:32296183
Cellular Component	GO:0005783	endoplasmic reticulum	FDFT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Fdft1	IDA		Rat	PMID:8509416|RGD:25671403
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Fdft1	IDA		Rat	PMID:16440058|RGD:1626611
Biological Process	GO:0006695	cholesterol biosynthetic process	Fdft1	IMP		Rat	PMID:16440058|RGD:1626611
Biological Process	GO:0045338	farnesyl diphosphate metabolic process	Fdft1	IMP		Rat	PMID:16440058|RGD:1626611

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern