Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FARSA
  • Mouse genes Farsa
  • Rat genes Farsa
  • Zfish genes farsa
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Farsa

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004826	phenylalanine-tRNA ligase activity	FARSA	IDA		Human	PMID:20223217
Molecular Function	GO:0005515	protein binding	FARSA	IPI	UniProtKB:Q9NSD9	Human	PMID:20223217
Molecular Function	GO:0005515	protein binding	FARSA	IPI	UniProtKB:Q9BQ95	Human	PMID:21163940
Molecular Function	GO:0005515	protein binding	FARSA	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	FARSA	IPI	UniProtKB:Q9P2A4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FARSA	IPI	UniProtKB:Q9NSD9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	FARSA	IPI	UniProtKB:Q9BUL8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FARSA	IPI	UniProtKB:Q9H9E3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FARSA	IPI	UniProtKB:Q9NSD9	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	FARSA	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	Farsa	IDA		Rat	PMID:3880707|RGD:11344936
Cellular Component	GO:0016020	membrane	FARSA	HDA		Human	PMID:19946888
Cellular Component	GO:0009328	phenylalanine-tRNA ligase complex	FARSA	IPI		Human	PMID:20223217
Cellular Component	GO:0009328	phenylalanine-tRNA ligase complex	FARSA	IDA		Human	PMID:20223217
Biological Process	GO:0006432	phenylalanyl-tRNA aminoacylation	FARSA	IDA		Human	PMID:20223217
Biological Process	GO:0051290	protein heterotetramerization	FARSA	IDA		Human	PMID:20223217

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern