Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DUXB
  • Mouse genes Duxbl1
  • Rat genes Dux4
  • Zfish genes mxtx1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Duxbl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005634	nucleus	Duxbl1	IDA		Mouse	PMID:20063414
Biological Process	GO:0035050	embryonic heart tube development	mxtx1	IMP	ZFIN:ZDB-MRPHLNO-061220-1	Zfish	PMID:17008449
Biological Process	GO:0035050	embryonic heart tube development	mxtx1	IMP	ZFIN:ZDB-MRPHLNO-061220-2	Zfish	PMID:17008449
Biological Process	GO:0035050	embryonic heart tube development	mxtx1	IMP	ZFIN:ZDB-MRPHLNO-061220-3	Zfish	PMID:17008449
Biological Process	GO:0030335	positive regulation of cell migration	mxtx1	IMP	ZFIN:ZDB-MRPHLNO-061220-2	Zfish	PMID:17008449
Biological Process	GO:0030335	positive regulation of cell migration	mxtx1	IMP	ZFIN:ZDB-MRPHLNO-061220-1	Zfish	PMID:17008449
Biological Process	GO:0030335	positive regulation of cell migration	mxtx1	IMP	ZFIN:ZDB-MRPHLNO-061220-3	Zfish	PMID:17008449
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	mxtx1	IMP	ZFIN:ZDB-MRPHLNO-061220-1	Zfish	PMID:17008449
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	mxtx1	IDA		Zfish	PMID:17008449
Biological Process	GO:0045580	regulation of T cell differentiation	Duxbl1	IDA		Mouse	PMID:17911620
Biological Process	GO:0001757	somite specification	mxtx1	IGI	ZFIN:ZDB-GENO-980202-1326,ZFIN:ZDB-MRPHLNO-061220-1	Zfish	PMID:17008449

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern