Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DPH1
  • Mouse genes Dph1
  • Rat genes Dph1
  • Zfish genes dph1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dph1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0090560	2-(3-amino-3-carboxypropyl)histidine synthase activity	Dph1	IGI	UniProtKB:P40487	Mouse	MGI:MGI:3773784|PMID:15485916
Molecular Function	GO:0005515	protein binding	DPH1	IPI	UniProtKB:Q12800	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	Dph1	IPI	UniProtKB:Q9CR25	Mouse	MGI:MGI:3773784|PMID:15485916
Cellular Component	GO:0030054	cell junction	DPH1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	DPH1	IDA		Human	GO_REF:0000052
Biological Process	GO:0048144	fibroblast proliferation	Dph1	IMP	MGI:MGI:3033425	Mouse	PMID:14744934
Biological Process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	Dph1	IMP		Mouse	MGI:MGI:5603957|PMID:24895408

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern