Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DCLRE1B
  • Mouse genes Dclre1b
  • Rat genes Dclre1b
  • Zfish genes dclre1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dclre1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008409	5'-3' exonuclease activity	DCLRE1B	IDA		Human	PMID:16730175
Molecular Function	GO:0008409	5'-3' exonuclease activity	DCLRE1B	IDA		Human	PMID:20655466
Molecular Function	GO:0008409	5'-3' exonuclease activity	DCLRE1B	IDA		Human	PMID:22692201
Molecular Function	GO:0008409	5'-3' exonuclease activity	Dclre1b	IMP		Mouse	MGI:MGI:4830207|PMID:20619712
Molecular Function	GO:0008409	5'-3' exonuclease activity	Dclre1b	IMP		Mouse	MGI:MGI:4462732|PMID:20551906
Molecular Function	GO:0008800	beta-lactamase activity	DCLRE1B	IDA		Human	PMID:31434986
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q15554	Human	PMID:16730175
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q15554	Human	PMID:18202258
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q96R06	Human	PMID:19197158
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q15554	Human	PMID:20479256
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q15554	Human	PMID:20655466
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q15554	Human	PMID:21217703
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q15554	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q15554	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q86UR1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:P02649	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:P21964-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:P26378-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:P49768-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:P50570-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:P54252	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q92597	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DCLRE1B	IPI	UniProtKB:Q9NUW8	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Dclre1b	IPI	UniProtKB:O35144	Mouse	MGI:MGI:4830207|PMID:20619712
Molecular Function	GO:0042803	protein homodimerization activity	DCLRE1B	IDA		Human	PMID:20479256
Molecular Function	GO:0044877	protein-containing complex binding	DCLRE1B	IPI	ComplexPortal:CPX-152	Human	PMID:18202258
Cellular Component	GO:0005813	centrosome	DCLRE1B	IDA		Human	PMID:19197158
Cellular Component	GO:0000781	chromosome, telomeric region	DCLRE1B	IDA		Human	PMID:24270157
Cellular Component	GO:0000781	chromosome, telomeric region	DCLRE1B	IDA		Human	PMID:16730175
Cellular Component	GO:0000781	chromosome, telomeric region	DCLRE1B	HDA		Human	PMID:19135898
Cellular Component	GO:0000781	chromosome, telomeric region	DCLRE1B	IDA		Human	PMID:20479256
Cellular Component	GO:0000781	chromosome, telomeric region	DCLRE1B	IDA		Human	PMID:20655466
Cellular Component	GO:0000781	chromosome, telomeric region	Dclre1b	IDA		Mouse	MGI:MGI:4462732|PMID:20551906
Cellular Component	GO:0000781	chromosome, telomeric region	Dclre1b	IDA		Mouse	MGI:MGI:4830207|PMID:20619712
Cellular Component	GO:0016604	nuclear body	DCLRE1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	DCLRE1B	IDA		Human	GO_REF:0000052
Biological Process	GO:0036297	interstrand cross-link repair	DCLRE1B	IMP		Human	PMID:20479256
Biological Process	GO:0031848	protection from non-homologous end joining at telomere	DCLRE1B	IMP		Human	PMID:16730175
Biological Process	GO:0031848	protection from non-homologous end joining at telomere	DCLRE1B	IMP		Human	PMID:20479256
Biological Process	GO:0031848	protection from non-homologous end joining at telomere	Dclre1b	IMP		Mouse	MGI:MGI:4830207|PMID:20619712
Biological Process	GO:0031848	protection from non-homologous end joining at telomere	Dclre1b	IMP		Mouse	MGI:MGI:4462732|PMID:20551906
Biological Process	GO:0016233	telomere capping	DCLRE1B	IMP		Human	PMID:20479256
Biological Process	GO:0000723	telomere maintenance	DCLRE1B	IMP		Human	PMID:20655466
Biological Process	GO:0010833	telomere maintenance via telomere lengthening	DCLRE1B	IMP		Human	PMID:20479256
Biological Process	GO:0031860	telomeric 3' overhang formation	Dclre1b	IMP		Mouse	MGI:MGI:4830207|PMID:20619712
Biological Process	GO:0031860	telomeric 3' overhang formation	Dclre1b	IMP		Mouse	MGI:MGI:4462732|PMID:20551906
Biological Process	GO:0031627	telomeric loop formation	Dclre1b	IMP		Mouse	MGI:MGI:4830207|PMID:20619712

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern