Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CYP2W1
  • Mouse genes Cyp2w1
  • Rat genes Cyp2w1
  • Zfish genes cyp2k16,cyp2k18
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cyp2w1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005503	all-trans retinal binding	CYP2W1	IDA		Human	PMID:26936974
Molecular Function	GO:1904768	all-trans-retinol binding	CYP2W1	IDA		Human	PMID:26936974
Molecular Function	GO:0008401	retinoic acid 4-hydroxylase activity	CYP2W1	IDA		Human	PMID:26936974
Molecular Function	GO:0001972	retinoic acid binding	CYP2W1	IDA		Human	PMID:26936974
Cellular Component	GO:0009986	cell surface	CYP2W1	IDA		Human	PMID:20805301
Cellular Component	GO:0005788	endoplasmic reticulum lumen	CYP2W1	IDA		Human	PMID:20805301
Biological Process	GO:0046222	aflatoxin metabolic process	CYP2W1	IDA		Human	PMID:16551781
Biological Process	GO:0006644	phospholipid metabolic process	CYP2W1	IDA		Human	PMID:22591743
Biological Process	GO:0034653	retinoic acid catabolic process	CYP2W1	IDA		Human	PMID:26936974
Biological Process	GO:0006805	xenobiotic metabolic process	CYP2W1	IDA		Human	PMID:16551781

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern