Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CPSF7
  • Mouse genes Cpsf7
  • Rat genes Cpsf7
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cpsf7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:O43639	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:O43809	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:P26368	Human	PMID:17024186
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:O43809	Human	PMID:20695905
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:O43639	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:O43809	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:P49760	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:P84022	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:Q06455-4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:Q08117	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:Q15437	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:Q7L775	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:Q9BV90	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:Q9H6L4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:O43809	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:O43809	Human	PMID:29276085
Molecular Function	GO:0005515	protein binding	CPSF7	IPI	UniProtKB:Q6UN15	Human	PMID:29276085
Molecular Function	GO:0003723	RNA binding	CPSF7	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	CPSF7	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	CPSF7	IDA		Human	PMID:19864460
Cellular Component	GO:0016020	membrane	CPSF7	HDA		Human	PMID:19946888
Cellular Component	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	CPSF7	IDA		Human	PMID:23187700
Cellular Component	GO:0005849	mRNA cleavage factor complex	CPSF7	IPI		Human	PMID:20695905
Cellular Component	GO:0005849	mRNA cleavage factor complex	CPSF7	IDA		Human	PMID:20695905
Cellular Component	GO:0005849	mRNA cleavage factor complex	CPSF7	IDA		Human	PMID:29276085
Cellular Component	GO:0005634	nucleus	CPSF7	IDA		Human	PMID:19864460
Cellular Component	GO:0005634	nucleus	CPSF7	IDA		Human	PMID:20695905
Biological Process	GO:1990120	messenger ribonucleoprotein complex assembly	CPSF7	IDA		Human	PMID:29276085
Biological Process	GO:0031124	mRNA 3'-end processing	CPSF7	IDA		Human	PMID:20695905
Biological Process	GO:0110104	mRNA alternative polyadenylation	CPSF7	IMP		Human	PMID:29276085
Biological Process	GO:0098789	pre-mRNA cleavage required for polyadenylation	CPSF7	IDA		Human	PMID:20695905
Biological Process	GO:0098789	pre-mRNA cleavage required for polyadenylation	CPSF7	IMP		Human	PMID:20695905
Biological Process	GO:0098789	pre-mRNA cleavage required for polyadenylation	CPSF7	IMP		Human	PMID:23187700
Biological Process	GO:0051290	protein heterotetramerization	CPSF7	IDA		Human	PMID:23187700
Biological Process	GO:0051262	protein tetramerization	CPSF7	IDA		Human	PMID:20695905

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern