Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CNOT6
  • Mouse genes Cnot6
  • Rat genes Cnot6
  • Zfish genes cnot6a,cnot6b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cnot6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030374	nuclear receptor coactivator activity	CNOT6	IDA		Human	PMID:18180299
Molecular Function	GO:0004535	poly(A)-specific ribonuclease activity	CNOT6	IDA		Human	PMID:11889047
Molecular Function	GO:0004535	poly(A)-specific ribonuclease activity	CNOT6	IDA		Human	PMID:18377426
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:Q9UFF9	Human	PMID:11747467
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:Q9UIV1	Human	PMID:11747467
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:P26651	Human	PMID:15687258
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:Q07352	Human	PMID:15687258
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:A5YKK6	Human	PMID:17452450
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:Q9UFF9	Human	PMID:17452450
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:Q9H4Z2	Human	PMID:18180299
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:Q07352	Human	PMID:18326031
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:Q86TB9	Human	PMID:20584987
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:Q9HCJ0	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:A5YKK6	Human	PMID:22977175
Molecular Function	GO:0005515	protein binding	CNOT6	IPI	UniProtKB:A5YKK6	Human	PMID:26496610
Molecular Function	GO:0004532	RNA exonuclease activity	CNOT6	IDA		Human	PMID:11889047
Cellular Component	GO:0030014	CCR4-NOT complex	CNOT6	IDA		Human	PMID:19558367
Cellular Component	GO:0016020	membrane	CNOT6	HDA		Human	PMID:19946888
Biological Process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA	CNOT6	IDA		Human	PMID:20065043
Biological Process	GO:0070966	nuclear-transcribed mRNA catabolic process, no-go decay	CNOT6	IMP		Human	PMID:15314026
Biological Process	GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	CNOT6	IMP		Human	PMID:20595389
Biological Process	GO:0008284	positive regulation of cell population proliferation	CNOT6	IMP		Human	PMID:21233283
Biological Process	GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly	CNOT6	IMP		Human	PMID:21233283

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern