Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLRN1
  • Mouse genes Clrn1
  • Rat genes Clrn1
  • Zfish genes clrn1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clrn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:O14523	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:O14880	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:O75396	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:P11215	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:P56557	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q4LDR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q53HI1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q6N075	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q6PL45-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q6ZT21	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q8IXM6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q8N130	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q8N5W8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q8N661	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q8N682	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q8N6F1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q8NHW4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q8WVQ1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q8WW34-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q96MV8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q9BVK2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q9BVK8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q9H0R3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q9NRS4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q9NV12	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLRN1	IPI	UniProtKB:Q9Y231	Human	PMID:32296183
Cellular Component	GO:0045178	basal part of cell	Clrn1	IDA		Mouse	PMID:19539019
Cellular Component	GO:0035869	ciliary transition zone	clrn1	IDA		Zfish	PMID:25365995
Cellular Component	GO:0030027	lamellipodium	CLRN1	IDA		Human	PMID:19423712
Cellular Component	GO:0015630	microtubule cytoskeleton	Clrn1	IDA		Mouse	PMID:19539019
Cellular Component	GO:0005902	microvillus	CLRN1	IDA		Human	PMID:19423712
Cellular Component	GO:0005886	plasma membrane	CLRN1	IDA		Human	PMID:19423712
Cellular Component	GO:0032420	stereocilium	Clrn1	IDA		Mouse	PMID:19539019
Cellular Component	GO:0032421	stereocilium bundle	clrn1	IDA		Zfish	PMID:26180195
Cellular Component	GO:0030140	trans-Golgi network transport vesicle	Clrn1	IDA		Mouse	PMID:19539019
Biological Process	GO:0007015	actin filament organization	CLRN1	IDA		Human	PMID:19423712
Biological Process	GO:0060117	auditory receptor cell development	Clrn1	IMP	MGI:MGI:3850171	Mouse	PMID:19414487
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Clrn1	IMP	MGI:MGI:3850171	Mouse	PMID:19414487
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Clrn1	IMP	MGI:MGI:3850171	Mouse	PMID:19423712
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	clrn1	IMP	ZFIN:ZDB-GENO-161111-3	Zfish	PMID:31097578
Biological Process	GO:0048870	cell motility	CLRN1	IDA		Human	PMID:19423712
Biological Process	GO:0060271	cilium assembly	clrn1	IMP	ZFIN:ZDB-MRPHLNO-150211-3,ZFIN:ZDB-MRPHLNO-150211-4,ZFIN:ZDB-MRPHLNO-150211-5	Zfish	PMID:25365995
Biological Process	GO:0050957	equilibrioception	CLRN1	IMP		Human	PMID:15521980
Biological Process	GO:0050957	equilibrioception	clrn1	IMP	ZFIN:ZDB-GENO-161111-1	Zfish	PMID:26180195
Biological Process	GO:0050885	neuromuscular process controlling balance	Clrn1	IMP	MGI:MGI:3850171	Mouse	PMID:19414487
Biological Process	GO:0045494	photoreceptor cell maintenance	CLRN1	IMP		Human	PMID:15521980
Biological Process	GO:0010592	positive regulation of lamellipodium assembly	CLRN1	IDA		Human	PMID:19423712
Biological Process	GO:0008104	protein localization	clrn1	IGI	ZFIN:ZDB-MRPHLNO-150211-6	Zfish	PMID:25365995
Biological Process	GO:0008104	protein localization	clrn1	IMP	ZFIN:ZDB-MRPHLNO-150211-3,ZFIN:ZDB-MRPHLNO-150211-4,ZFIN:ZDB-MRPHLNO-150211-5	Zfish	PMID:25365995
Biological Process	GO:0035418	protein localization to synapse	clrn1	IMP	ZFIN:ZDB-MRPHLNO-150211-3,ZFIN:ZDB-MRPHLNO-150211-4,ZFIN:ZDB-MRPHLNO-150211-5	Zfish	PMID:25365995
Biological Process	GO:0050953	sensory perception of light stimulus	CLRN1	IMP		Human	PMID:15521980
Biological Process	GO:0007605	sensory perception of sound	CLRN1	IMP		Human	PMID:15650299
Biological Process	GO:0007605	sensory perception of sound	Clrn1	IMP	MGI:MGI:3850171	Mouse	PMID:19414487
Biological Process	GO:0007605	sensory perception of sound	clrn1	IMP	ZFIN:ZDB-GENO-161111-1	Zfish	PMID:26180195
Biological Process	GO:0050808	synapse organization	clrn1	IMP	ZFIN:ZDB-MRPHLNO-150211-3,ZFIN:ZDB-MRPHLNO-150211-4,ZFIN:ZDB-MRPHLNO-150211-5	Zfish	PMID:25365995
Biological Process	GO:0036466	synaptic vesicle recycling via endosome	clrn1	IMP	ZFIN:ZDB-MRPHLNO-150211-3,ZFIN:ZDB-MRPHLNO-150211-4,ZFIN:ZDB-MRPHLNO-150211-5	Zfish	PMID:25365995

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern