Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLINT1
  • Mouse genes Clint1
  • Rat genes Clint1
  • Zfish genes clint1a,clint1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clint1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	CLINT1	HDA		Human	PMID:25468996
Molecular Function	GO:0030276	clathrin binding	CLINT1	IPI	UniProtKB:Q00610	Human	PMID:12429846
Molecular Function	GO:0030276	clathrin binding	Clint1	IDA		Rat	PMID:12213833|RGD:1303953
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:Q9UJY4	Human	PMID:12429846
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:P22892	Human	PMID:14675752
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:O88384	Human	PMID:18033301
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:Q9UEU0	Human	PMID:18033301
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:Q9GZQ8	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:Q9H0R8	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:Q8WTR4-3	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CLINT1	IPI	UniProtKB:P63010	Human	PMID:35044719
Cellular Component	GO:0030136	clathrin-coated vesicle	Clint1	IDA		Rat	PMID:12213833|RGD:1303953
Cellular Component	GO:0005794	Golgi apparatus	CLINT1	IDA		Human	PMID:10942595
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	CLINT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	CLINT1	HDA		Human	PMID:19946888
Cellular Component	GO:0005654	nucleoplasm	CLINT1	IDA		Human	GO_REF:0000052
Biological Process	GO:0048268	clathrin coat assembly	Clint1	IMP		Rat	PMID:12213833|RGD:1303953
Biological Process	GO:0045682	regulation of epidermis development	clint1a	IMP	ZFIN:ZDB-GENO-100818-4	Zfish	PMID:19570844
Biological Process	GO:0045682	regulation of epidermis development	clint1a	IGI	ZFIN:ZDB-MRPHLNO-050817-1,ZFIN:ZDB-MRPHLNO-100510-12	Zfish	PMID:19570844

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern