Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLEC4F
  • Mouse genes Clec4f
  • Rat genes Clec4f
  • Zfish genes cd209,si:ch73-111e15.1,si:ch73-122g19.1,zmp:0000000924,zmp:0000000937
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clec4f

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005534	galactose binding	Clec4f	IDA		Mouse	PMID:23762286
Molecular Function	GO:0051861	glycolipid binding	Clec4f	IDA		Mouse	PMID:23762286
Cellular Component	GO:0009986	cell surface	cd209	IDA		Zfish	PMID:25445909
Cellular Component	GO:0005886	plasma membrane	Clec4f	IDA		Mouse	PMID:23762286
Biological Process	GO:0002250	adaptive immune response	cd209	IDA		Zfish	PMID:19890038
Biological Process	GO:0002468	dendritic cell antigen processing and presentation	cd209	IDA		Zfish	PMID:25445909
Biological Process	GO:0051132	NK T cell activation	Clec4f	IMP	MGI:MGI:5529277	Mouse	PMID:23762286
Biological Process	GO:0010628	positive regulation of gene expression	Clec4f	HMP		Rat	PMID:33633725|RGD:151665761
Biological Process	GO:0002286	T cell activation involved in immune response	cd209	IDA		Zfish	PMID:25445909

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern