Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CFAP418
  • Mouse genes Cfap418
  • Rat genes Cfap418
  • Zfish genes cfap418
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cfap418

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CFAP418	IPI	UniProtKB:P04632	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	CFAP418	IPI	UniProtKB:Q3B820	Human	PMID:36233334
Cellular Component	GO:0030054	cell junction	CFAP418	IDA		Human	GO_REF:0000052
Cellular Component	GO:0097546	ciliary base	CFAP418	IDA		Human	PMID:22177090
Cellular Component	GO:0005737	cytoplasm	CFAP418	IDA		Human	PMID:22177090
Cellular Component	GO:0005737	cytoplasm	Cfap418	IDA		Mouse	MGI:MGI:6148650|PMID:29440555
Cellular Component	GO:0005829	cytosol	CFAP418	IDA		Human	GO_REF:0000052
Cellular Component	GO:0001917	photoreceptor inner segment	Cfap418	IDA		Mouse	MGI:MGI:6148650|PMID:29440555
Cellular Component	GO:0005886	plasma membrane	CFAP418	IDA		Human	GO_REF:0000052
Biological Process	GO:0070121	Kupffer's vesicle development	cfap418	IMP	ZFIN:ZDB-MRPHLNO-161213-3	Zfish	PMID:27008867
Biological Process	GO:0070121	Kupffer's vesicle development	cfap418	IMP	ZFIN:ZDB-MRPHLNO-161213-4	Zfish	PMID:27008867
Biological Process	GO:0032402	melanosome transport	cfap418	IMP	ZFIN:ZDB-MRPHLNO-161213-3	Zfish	PMID:27008867
Biological Process	GO:0032402	melanosome transport	cfap418	IMP	ZFIN:ZDB-MRPHLNO-161213-4	Zfish	PMID:27008867
Biological Process	GO:0008594	photoreceptor cell morphogenesis	Cfap418	IMP		Mouse	MGI:MGI:6148650|PMID:29440555

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern