Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CFAP410
  • Mouse genes Cfap410
  • Rat genes Cfap410
  • Zfish genes cfap410
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cfap410

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CFAP410	IPI	UniProtKB:O00244	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CFAP410	IPI	UniProtKB:Q53SE7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CFAP410	IPI	UniProtKB:Q96PY6	Human	PMID:26167768
Molecular Function	GO:0005515	protein binding	CFAP410	IPI	UniProtKB:Q96PY6	Human	PMID:26290490
Cellular Component	GO:0036064	ciliary basal body	CFAP410	IDA		Human	PMID:26167768
Cellular Component	GO:0036064	ciliary basal body	CFAP410	IDA		Human	PMID:26294103
Cellular Component	GO:0036064	ciliary basal body	Cfap410	IDA		Mouse	MGI:MGI:5700130|PMID:26167768
Cellular Component	GO:0036064	ciliary basal body	Cfap410	IDA		Mouse	PMID:29899041
Cellular Component	GO:0005737	cytoplasm	CFAP410	IDA		Human	PMID:21834987
Cellular Component	GO:0005737	cytoplasm	CFAP410	IDA		Human	PMID:26290490
Cellular Component	GO:0005829	cytosol	CFAP410	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	CFAP410	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	CFAP410	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	CFAP410	IDA		Human	PMID:9325172
Cellular Component	GO:0097733	photoreceptor cell cilium	Cfap410	IDA		Mouse	PMID:29899041
Cellular Component	GO:0032391	photoreceptor connecting cilium	Cfap410	IDA		Mouse	MGI:MGI:5770162|PMID:26974433
Cellular Component	GO:0001750	photoreceptor outer segment	CFAP410	IDA		Human	PMID:27548899
Cellular Component	GO:0005886	plasma membrane	CFAP410	IDA		Human	PMID:21834987
Biological Process	GO:0060271	cilium assembly	Cfap410	IMP		Mouse	PMID:21289087
Biological Process	GO:0007010	cytoskeleton organization	CFAP410	IMP		Human	PMID:21834987
Biological Process	GO:0008360	regulation of cell shape	CFAP410	IMP		Human	PMID:21834987
Biological Process	GO:0007224	smoothened signaling pathway	Cfap410	IMP		Mouse	PMID:21289087

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern