Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CDH26
  • Mouse genes Cdh26
  • Rat genes Cdh26
  • Zfish genes cdh26.1,cdh26.2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cdh26

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045294	alpha-catenin binding	CDH26	IDA		Human	PMID:28051089
Molecular Function	GO:0008013	beta-catenin binding	CDH26	IDA		Human	PMID:28051089
Molecular Function	GO:0070097	delta-catenin binding	CDH26	IDA		Human	PMID:28051089
Molecular Function	GO:0005178	integrin binding	CDH26	IDA		Human	PMID:28051089
Molecular Function	GO:0005515	protein binding	CDH26	IPI	UniProtKB:O60716,UniProtKB:P35221,UniProtKB:P35222	Human	PMID:28051089
Cellular Component	GO:0015630	microtubule cytoskeleton	CDH26	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	CDH26	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	CDH26	IDA		Human	PMID:28051089
Biological Process	GO:0035710	CD4-positive, alpha-beta T cell activation	CDH26	IDA		Human	PMID:28051089

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern