Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CDC42BPB
  • Mouse genes Cdc42bpb
  • Rat genes Cdc42bpb
  • Zfish genes cdc42bpb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cdc42bpb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Cdc42bpb	IPI	UniProtKB:Q96A23	Mouse	MGI:MGI:5294308|PMID:12522145
Molecular Function	GO:0005515	protein binding	Cdc42bpb	IPI	UniProtKB:Q9QUI1	Mouse	MGI:MGI:5908532|PMID:25107909
Molecular Function	GO:0005515	protein binding	Cdc42bpb	IPI	UniProtKB:D4A8G3	Rat	PMID:18854160|RGD:8553532
Molecular Function	GO:0005515	protein binding	Cdc42bpb	IPI	UniProtKB:Q566R4	Rat	PMID:25107909|RGD:13210541
Molecular Function	GO:0004672	protein kinase activity	CDC42BPB	IDA		Human	PMID:21949762
Molecular Function	GO:0004674	protein serine/threonine kinase activity	Cdc42bpb	IDA		Rat	PMID:9418861|RGD:632451
Molecular Function	GO:0044877	protein-containing complex binding	CDC42BPB	IPI	UniProtKB:A0AV58|UniProtKB:Q8C079|UniProtKB:Q9BRV8	Human	PMID:25743393
Molecular Function	GO:0031267	small GTPase binding	Cdc42bpb	IDA		Rat	PMID:9418861|RGD:632451
Cellular Component	GO:0042641	actomyosin	CDC42BPB	IDA		Human	PMID:18854160
Cellular Component	GO:0042641	actomyosin	Cdc42bpb	IDA		Rat	PMID:18854160|RGD:8553532
Cellular Component	GO:0070062	extracellular exosome	CDC42BPB	HDA		Human	PMID:19056867
Biological Process	GO:0030036	actin cytoskeleton organization	Cdc42bpb	IMP		Rat	PMID:9418861|RGD:632451
Biological Process	GO:0031032	actomyosin structure organization	CDC42BPB	IMP		Human	PMID:18854160
Biological Process	GO:0031032	actomyosin structure organization	Cdc42bpb	IMP		Rat	PMID:18854160|RGD:8553532
Biological Process	GO:0016477	cell migration	CDC42BPB	IMP		Human	PMID:18854160
Biological Process	GO:0016477	cell migration	Cdc42bpb	IMP		Rat	PMID:18854160|RGD:8553532
Biological Process	GO:0006468	protein phosphorylation	CDC42BPB	IDA		Human	PMID:21949762
Biological Process	GO:0006468	protein phosphorylation	Cdc42bpb	IDA		Rat	PMID:9418861|RGD:632451

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern